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Division of Biomedical Informatics Division of Biomedical Informatics

Biomedical Informatics Students

Brian Daniel Johnson

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    Full Name

    Research Interests

    Education 

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David Brian Laub

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    Full Name

    Research Interests

    Education 

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Grace Yu

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    Full Name

    Research Interests

    Education 

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Hyrum Surya Eddington

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    BISB PhD Student

    Research Interests

    Education

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Kuan-Hung (Peter) Yeh

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    BISB PhD Student

    Research Interests

    Real-World Evidence (RWE), Survival Analysis, Precision Oncology, Clinical Trials

    Education

    M.S. in Biostatistics, University of California, Los Angeles (UCLA)

    B.S. in Public Health, National Taiwan University (NTU)

     

    Contact 

    k1yeh@ucsd.edu

    Kuan-Hung (Peter) Yeh | LinkedIn

Nathan Tran

  • BISB PhD Student

    BISB PhD Student

    Research Interests

    Multimodal AI applications in disease prediction and characterization.

    Education

     B.S. in Computational & Systems Biology, University of California Los Angeles, 2025

     

    Contact 

    nat011@ucsd.edu

    Nathan Tran | LinkedIn

Samuel R. Reynolds

  • BISB PhD Student

    BISB PhD Student

    Research Interests

    Epigenomics, Understanding the tumor microenvironment, Cancer modeling

    Education 

    B.A. in Biological Sciences, Dartmouth College, 2023

    Selected Publications

    Reynolds, S. R., Zhang, Z., Salas, L. A., & Christensen, B. C. (2024). Tumor microenvironment deconvolution identifies cell-type-independent aberrant DNA methylation and gene expression in prostate cancer. Clinical epigenetics16(1), 5. https://doi.org/10.1186/s13148-023-01609-3
    Reynolds, S. R., Salas, L. A., Chen, J. Q., & Christensen, B. C. (2024). Detailed immune profiling in pediatric Crohn's disease using methylation cytometry. Epigenetics19(1), 2289786. https://doi.org/10.1080/15592294.2023.2289786
    Zhang, Z.,  Reynolds, S. R.,  Stolrow, H. G.,  Chen, J.-Q.,  Christensen, B. C., &  Salas, L. A. (2023).  Deciphering the role of immune cell composition in epigenetic age acceleration: Insights from cell-type deconvolution applied to human blood epigenetic clocks. Aging Cell,  00, e14071. https://doi.org/10.1111/acel.14071

    Contact

    LinkedIn

     

Varshini Sathish

  • BISB PhD Student

    BISB PhD Student

    Research Interests

    Predictive modeling using machine/deep learning, disease management, precision medicine, genomics

    Education 

    B.S. in Bioengineering: Bioinformatics, University of California, San Diego (2023)

    Selected Publications

    Jia H, Simpson S, Sathish V, et al. Development and benchmarking of machine learning models to classify patients suitable for outpatient lower extremity joint arthroplasty. J Clin Anesth. 2023;88:111147. doi:10.1016/j.jclinane.2023.111147
    Simpson S, Zhong W, Mehdipour S, Armaneous M, Sathish V, Walker N, Said ET, Gabriel RA. Classifying high risk patients for persistent opioid use after major spine surgery: A machine learning approach. Anesth Analg 2024 

    Contact

    https://www.linkedin.com/in/varshinisathish/ 

Wilfredo Gabriel Gonzalez-Rivera

  • BISB PhD Student

    BISB PhD Student

    Research Interests 

    Precision Medicine, Genetics, Genomics, Social Science in Genomics

     Research Focus: "I aim to increase recognition of the importance of including underrepresented racial and ethnic groups in genomic research to improve the accuracy and generalizability of precision medicine for all."

    Education 

    B.S. Computer Science - University of Puerto Rico, Mayaguez, 2021
    B.S. Industrial Biotechnology - University of Puerto Rico, Mayaguez, 2021

    Awards

    STARS Graduate Advocate, 2023
    Alfred P. Sloan Scholar Fellowship, 2022
    Competitive Edge Scholar, 2022

    Contact 

    wgonzalezrivera@ucsd.edu
     

Ziqi Xu

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    BISB PhD Student

    Research Interests 

     

    Education

     

    Selected Publications 

     

     

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