Biomedical Informatics Publications
You are what you excrete. Guccione C, McDonald D, Fielding-Miller R, Curtius K , Knight R. Nat Microbiol. 2023 May 25. doi: 10.1038/s41564-023-01395-x. Online ahead of print. PMID: 37231087 No abstract available.Epidemiology and factors associated with cannabis use among patients with glaucoma in the All of Us Research Program. Baxter SL . Heliyon. 2023 Apr 25;9(5):e15811. doi: 10.1016/j.heliyon.2023.e15811. eCollection 2023 May. PMID: 37215923 Free PMC article.Dameff C, Tully J, Chan TC, Castillo EM, Savage S, Maysent P, Hemmen TM, Clay BJ, Longhurst CA. Ransomware Attack Associated With Disruptions at Adjacent Emergency Departments in the US. JAMA Netw Open. 2023 May 1;6(5):e2312270. doi: 10.1001/jamanetworkopen.2023.12270. PMID: 37155166 Hogarth M , John D, Li Y, Wang-Rodriguez J, Chakladar J, Li WT, Mehta SR, Jain S, Ongkeko WM. Clinical Characteristics and Comorbidities associated with SARS-CoV-2 breakthrough infection in the California Healthcare Systems. Am J Med Sci. 2023 May 3:S0002-9629(23)01166-7. doi: 10.1016/j.amjms.2023.04.019. Online ahead of print. PMID: 37146904 Implementation of KIDMATCH: A Clinical Decision Support Tool for Diagnosing Pediatric Patients with Multisystem Inflammatory Syndrome and Kawasaki Disease. Lam JY , Richardson A, Kanegaye JT, Tremoulet AH, Shimizu C, Stadnick NA, Burns JC, Nemati S , Gardiner MA.AMIA Annu Symp Proc. 2023 Apr 29;2022:653-661. eCollection 2022. PMID: 37128449
Isakari M, Sanchez A, Conic R, Peretti J, Saito K, Sitapati AM , Millen M , Longhurst C . Benefits and Challenges of Transitioning Occupational Health to an Enterprise Electronic Health Record. J Occup Environ Med. 2023 Apr 12. doi: 10.1097/JOM.0000000000002864. Online ahead of print. PMID: 37043385
Ohno-Machado L , Jiang X, Kuo TT , Tao S, Chen L, Ram PM, Zhang GQ, Xu H. A Hierarchical Strategy to Minimize Privacy Risk when Linking "De-identified" Data in Biomedical Research Consortia . J Biomed Inform. 2023 Feb 16:104322. doi: 10.1016/j.jbi.2023.104322. Online ahead of print. PMID: 36806328 Rogers P, Boussina AE , Shashikumar SP, Wardi G, Longhurst CA , Nemati S . J Med Internet Res. Optimizing the Implementation of Clinical Predictive Models to Minimize National Costs: Sepsis Case Study PMID: 36780203
Lee TC, Radha-Saseendrakumar B, Delavar A, Ye GY, Ting MA, Topilow NJ, Bass J, Korn BS, Kikkawa DO, Baxter SL , Liu CY. Evaluation of Depression and Anxiety in a Diverse Population With Thyroid Eye Disease Using the Nationwide NIH All of Us Database.
Fatemeh Amrollahi , Supreeth P Shashikumar , Angela Meier , Lucila Ohno-Machado , Shamim Nemati , Gabriel Wardi, All of Us Data Helps Better Predict Hospital Readmission for Patients With Sepsis , National Institue of Health All of Us Research Program, October 4, 2022 Fatemeh Amrollahi , Supreeth P Shashikumar, Angela Meier , Lucila Ohno-Machado , Shamim Nemati, Gabriel Wardi, Inclusion of social determinants of health improves sepsis readmission prediction models , Journal of the American Medical Informatics AssociationTransforming Biomedical Informatics and Health Information Access: Don Lindberg and the U.S. National Library of Medicine , Tong EK, Zhu SH, Anderson CM, Avdalovic MV, Amin AN, Diamant AL, Fong TW, Clay B , El-Kareh R , Sankaran S, Bonniot C, Kirby CA, Mayoral A, Sarna LImplementation, Maintenance, and Outcomes of an Electronic Referral to a Tobacco Quitline Across Five Health Systems. Nicotine Tob Res. 2023 Mar 29:ntad008. doi: 10.1093/ntr/ntad008. Online ahead of print.PMID: 36977494
Kuo TT , Pham A , Edelson ME, Kim J , Chan J, Gupta Y, Ohno-Machado L ; Blockchain-Enabled Immutable, Distributed, and Highly Available Clinical Research Activity Logging System for Federated COVID-19 Data Analysis from Multiple Institutions. J Am Med Inform Assoc. 2023 Mar 14:ocad049. doi: 10.1093/jamia/ocad049. Online ahead of print. PMID: 36916740Nakagawa K, Moukheiber L, Celi LA, Patel M, Mahmood F, Gondim D, Hogarth M , Levenson R. AI in Pathology: What could possibly go wrong? Semin Diagn Pathol. 2023 Mar 2:S0740-2570(23)00017-5. doi: 10.1053/j.semdp.2023.02.006. Online ahead of print. PMID: 36882343 Review.
D'Antonio M, Nguyen JP , Arthur TD ; Fine mapping spatiotemporal mechanisms of genetic variants underlying cardiac traits and disease. iPSCORE Consortium; Matsui H, D'Antonio-Chronowska A, Frazer KA. Nat Commun. 2023 Feb 28;14(1):1132. doi: 10.1038/s41467-023-36638-2. PMID: 36854752
Ohno-Machado L , Jiang X, Kuo TT , Tao S, Chen L, Ram PM, Zhang GQ, Xu H.A Hierarchical Strategy to Minimize Privacy Risk when Linking "De-identified" Data in Biomedical Research Consortia. J Biomed Inform. 2023 Feb 16:104322. doi: 10.1016/j.jbi.2023.104322. Online ahead of print. PMID: 36806328Rogers P, Boussina AE , Shashikumar SP, Wardi G, Longhurst CA , Nemati S . Optimizing the Implementation of Clinical Predictive Models to Minimize National Costs: Sepsis Case Study. J Med Internet Res. 2023 Feb 13;25:e43486. doi: 10.2196/43486. PMID: 36780203
Evaluation of Depression and Anxiety in a Diverse Population With Thyroid Eye Disease Using the Nationwide NIH All of Us Database . Ophthalmic Plast Reconstr Surg. 2023 Jan 24. doi: 10.1097/IOP.0000000000002318. Online ahead of print. PMID: 36727790. Baxter, SL., Representation Matters - Diversity in Retina Clinical Trails. PMID: 36201217, DOI: 10.1001/jamaophthalmol.2022.3930Matthews, B, Fredrickson, M, El-Kareh, R Structured case reviews for organizational learning about diagnostic vulnerabilities: initial experiences from two medical centers. & Diagnosis (Berl) 2020 Jan 28;7(1):27-35. doi: 10.1515/dx-2019-0032. Ohno-Machado L , Xu H. Coronavirus: indexed data speed up solutions . Nature 584, 192 (2020)
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